Develop Bugs

[Q] Titanium Backup on the Galaxy Nexus

How is everyone dealing with application backups on Titanium? specifically backing up TB files off the SGN
how are you pulling the TB backup files OFF the SGN other then using dropbox? when i connect via MTP, the TB backup files do not show up in windows explorer
thanks,

I just drag and dropped them into /TitaniumBackup/ on the root of MTP and it worked.
If it doesn't work, try making a new folder in the root of MTP.
Go into that new folder and copy paste /TitaniumBackup/ into /New Folder/ then after thats done move /TitaniumBackup/ back into the root folder.

zephiK said:
I just drag and dropped them into /TitaniumBackup/ on the root of MTP and it worked.
If it doesn't work, try making a new folder in the root of MTP.
Go into that new folder and copy paste /TitaniumBackup/ into /New Folder/ then after thats done move /TitaniumBackup/ back into the root folder.
Click to expand...
Click to collapse
restoring onto the nexus is easy because i can do like you said and it works great but what about backing up from your nexus to the PC. the files do not show up in MTP to copy to the PC.

titanium working well. i just bought the paid version yesterday. and i have all apps with data from my old phone. really happy about that.

qman66 said:
titanium working well. i just bought the paid version yesterday. and i have all apps with data from my old phone. really happy about that.
Click to expand...
Click to collapse
yes, it works great but how do you go about moving the newly backed up tb files off the sgn to the pc for safe keeping?

Try sharing a folder on your Windows Machine and using AndSMB Linda File Manager or eXplorer which will allow you to map to that shared drive from your Android Phone over the network. You can then just copy the files directly over your wireless connection.

cant you just copy and paste the folder onto your PC? thats all i do, the storage acts the same as an sdcard on windows 7

Switch to camera mode for large transfers, then switch back.

I flashed a new ROM today and then tried to restore my Titanium back. The ROM is rooted. Titanium went through the steps of restoring, but I coukd see none of the apps in the drawer and I had to reinstall from the Market one by one.
Did this happen to anybody?
EDIT: Silly of me, was using an old version which probably doesn't like ICS. The latest version works fine .

TB current doesnt work on my GN... it freeze on batch restore.

Is it possible to back up apps and settings on to an external flash drive using Titanium Backup if you have a USB host cable and the StickMount app?
http://forum.xda-developers.com/showthread.php?t=1401116&highlight=titanium+backup

zeke1988 said:
TB current doesnt work on my GN... it freeze on batch restore.
Click to expand...
Click to collapse
Same here.
It looks like the JNI call that Titanium Backup is using to restore the backups is causing a null pointer exception. So far I haven't been lucky googling for an answer.

daoist said:
Same here.
It looks like the JNI call that Titanium Backup is using to restore the backups is causing a null pointer exception. So far I haven't been lucky googling for an answer.
Click to expand...
Click to collapse
thats odd.. what rom are you using?
I also can't remember, does it still needs unknown sources ticked?

Ibanez33 said:
thats odd.. what rom are you using?
I also can't remember, does it still needs unknown sources ticked?
Click to expand...
Click to collapse
I'm on verizon stock 4.0.2, rooted.
I have unknown sources ticked (just in case).
It works when I choose the classic method under debugging options, I found out.

I used it yesterday with no issues on my GSN. Used batch back up, installed Android Revolution HD 2.1.2 and restored all apps etc. Worked as expected.

I'm having the same problem as OP stigmax and it doesnt seem like his (my) question got answered.
I used TB and it worked great. Now I want to take the backup files off my SGN and onto my laptop in case something terrible happens to the phone.
The /TitaniumBackup/ folder shows up in MTP and PTP, but both times the folder is empty.
Where did my backups go??

They show up fine on my PC...
stigmax said:
How is everyone dealing with application backups on Titanium? specifically backing up TB files off the SGN
how are you pulling the TB backup files OFF the SGN other then using dropbox? when i connect via MTP, the TB backup files do not show up in windows explorer
thanks,
Click to expand...
Click to collapse
Sent from my Galaxy Nexus using XDA App

Mnemoch said:
They show up fine on my PC...
Click to expand...
Click to collapse
Hmm. I've read that TB hasnt been fully optimized for ICS so maybe I'll just chalk it up to that and hope I can still restore if I need to.

[Solved] Any way to access an apk file immediately after flashing?

I'm not sure if this is possible as ICS has no built in file manager, but is there anywhere I can put an apk file that it would be accessible without one? Specifically I want to be able to open an apk to install a file manager as the first thing I do after flashing a rom, to avoid needing to go through the market.
I thought maybe I could leave it in sdcard/download but it seems like the downloads program is blind to anything in that folder that wasn't officially "downloaded". (I suppose I could upload one to my dropbox and download it via the browser, if there are no viable options). Also made a few stabs at getting the gallery program to show one but it seems to filter out anything that's not a picture or video.
Any ideas for places to stick an apk and get one of the stock programs to let me open it?

maybe email it to yourself?
but you would have to log into the email app to do that
but there isnt really anyway to access the file without a file explorer

Open your favourite rom zip, add your apk to /system/app, save the zip, push that zip to the phone, flash.

Peesashiz said:
maybe email it to yourself?
but you would have to log into the email app to do that
Click to expand...
Click to collapse
Yeah in general I'm trying to cut out the step of signing into anything and just restoring my apps from a backup before I need to cancel automatic restore functions (which I do want on and running once I do my own initial run of things).
bk201doesntexist said:
Open your favourite rom zip, add your apk to /system/app, save the zip, push that zip to the phone, flash.
Click to expand...
Click to collapse
I'm guessing this comes with the consequence of raising any apk added in this manner to system app level? Not that I distrust the apps I'd have in mind for this to do anything malicious themselves, but is there any danger of opening security holes by elevating apps not designed to be system apps?

What I've done many times is just enabling Air Plane as soon as I can after flashing a ROM. That's way I can install any apk I want.
Hope it helps.

heo_con184 said:
What I've done many times is just enabling Air Plane as soon as I can after flashing a ROM. That's way I can install any apk I want.
Click to expand...
Click to collapse
Hmm but then what is your method for getting to that apk? If you do it over wifi that seems to defeat the point, no?
Personally I've found that it works just fine to uncheck the boxes for recovery syncing during the setup process, and then just re-enabling them later in settings. (Alternately, not signing into my google account at all until I've performed a backup). That way even if I end up signing into the market to download a recovery app, it doesn't automatically try to re-download everything else on its own.
I'm starting to think that my dropbox solution will be the cleanest, as it'll be a simple step of opening the browser and downloading a single apk every time at the same link.
I bet that the inclusion of a basic file explorer will be one of those headline items in a future android release. A nice basic functionality that the bloggers can rehash to death before anything actually hits.

Download the file manager apk over wifi and install the APK via download manager.
I do it all the time with Chinese android tablets with no market access.
Or Bluetooth it from another device.
Or just use the market
LTE EX Galaxy Nexus - 4.0.3 AOSP
Asus Transformer - Revolver OC/UV

JoeSyr said:
Hmm but then what is your method for getting to that apk? If you do it over wifi that seems to defeat the point, no?
Personally I've found that it works just fine to uncheck the boxes for recovery syncing during the setup process, and then just re-enabling them later in settings. (Alternately, not signing into my google account at all until I've performed a backup). That way even if I end up signing into the market to download a recovery app, it doesn't automatically try to re-download everything else on its own.
I'm starting to think that my dropbox solution will be the cleanest, as it'll be a simple step of opening the browser and downloading a single apk every time at the same link.
I bet that the inclusion of a basic file explorer will be one of those headline items in a future android release. A nice basic functionality that the bloggers can rehash to death before anything actually hits.
Click to expand...
Click to collapse
Transfer by USB from my laptop.

Is there a way to do that in which the device will launch the apk you move over? When I copy files over usb, it only ever puts them into whatever directory, and I need a file explorer to interact with them on the phone. And then I'm back to square one, as far as this particular task is concerned (once things are up and running I just use the LAN option in ES file explorer and it's as convenient as could be).

you have the apk in your computer right?
connect the phone to pc, and use adb to install
'adb install <apk_file_name.apk>'

Ah. I haven't used adb since I first unlocked/rooted a few months ago. Guess it probably pays to be a little familiar with those tools; they don't even occur to me when problem solving these days.

JoeSyr said:
Ah. I haven't used adb since I first unlocked/rooted a few months ago. Guess it probably pays to be a little familiar with those tools; they don't even occur to me when problem solving these days.
Click to expand...
Click to collapse
mark thread as solved then, if that solved it

Well a completely in-phone solution would still be nice, but I guess if there were any of those they'd have come up by now.
I'll probably use abd if I'm actively working at my computer and a dropbox download otherwise.

Game data download import

Hi guys, I have installed Horn and The Dark Knight Rises and I was wondering how to import the downloaded data to another device.
Any ideas?
Games:
Horn
THE DARK KNIGHT RISES
nba jam on fire edition
Etc...
I don't have enough interweb connection to re-download the files on the other device. Any tips?
Thanks in advance
on xda for android and mistyping like a boss

Bump. Still need help
on xda for android and mistyping like a boss

If you setup you're google account on the other phone and go to the play store you can download it again
Edit : sorry didn't read correctly.
Try to transfer all data from the games from sd card to the same folders on the other phone ?
Verstuurd van mijn HTC One X

Which folders exactly? Haven't seen the 1.8gb folder for batman thing. Heh.
Is it saved in system\app? Or is that just the apk?
on xda for android and mistyping like a boss

Should be in /data/data
Sent from my HTC One X using xda app-developers app

I checked. They weren't there, used root explorer.
Weird, I'm just trying to move the big data download
on xda for android and mistyping like a boss
Edit: lol found it its in the sd freaking card

I would use Titanium Backup
Hi,
To backup any app + data, I use Titanium Backup. You will need root access, see this post where you can find links to several guides on how to root but much more useful information (I strongly recommend that you use the htcdev.com method to root your phone)
Titanium Backup is available on Google Play https://play.google.com/store/apps/details?id=com.keramidas.TitaniumBackup (desktop) / market://details?id=com.keramidas.TitaniumBackup (Android)
Once Titanium Backup is installed, follow this process:
Keep the default settings.
Click on Backup/Restore button
Select the app to backup
Click on Backup
Repeat the same process for each of your apps to backup
Files are stored by default in /mnt/sdcard/TitaniumBackup
So once your backup are completed, plug your phone to the USB Cable and your PC
Select "Mount as a disk drive" on your phone
On your PC, go to TitaniumBackup folder on your new mounted drive (Phone's SD Card), copy all the files to your PC
Unplug your phone.
Install Titanium Backup on your other phone
Plug it to your PC and mount your SDCard
From your PC, move the files you copied previously to the TitaniumBackup folder on your SDCard (if this folder does not exist, create it)
Unplug your phone
On this phone, go to TitaniumBackup
Click on the batch icon (Tick Icon in top right of the screen)
Scroll down and select "Restore missing apps with data"
Select / Deselect all the apps you want to restore (you should find all your backups from the 1st phone you've just copied)
Click on the tick in the top right of the screen to trigger the restore
That's it...
You can do some much with Titanium Backup that it is worth rooting your phone just for this app. There is a Pro version that costs $6.95 (AUD) This is one a the very few apps over $3 I paid for and don't regret it at all. More info on Titanium Backup available here which includes a very good wiki.
I am in no way affiliated with this product/this company or the developer of this app but I strongly believe this is one of the best app on the Android Market.
I would also avoid any method involving to copy manually the system or data folders, not likely to work on different devices.

Thanks for that. I do have tb and the downloaded extra resources are never included there.
It's found on one of these directories and you can manually copy:
/sdcard/android/data/com.nameofapp
And
/sdcard/android/obb/com.nameofapp
Just found these earlier and it does work well.
on xda for android and mistyping like a boss

[Q] "The application is not registered" error when I launch kindle reader. Ugh.

[Q] "The application is not registered" error when I launch kindle reader. Ugh.
Very few search results for this error, so I'm out of ideas. It has come up once before but the thread is closed -->
http://forum.xda-developers.com/showthread.php?t=1356441
My reader worked fine for 8 months. Then it updated to version 3.7.0.108.
Now when I click any of the "tabs" such as home, archive, on device, etc... I get this:
"The application is not registered. Trying to register it now. Please try again in a few seconds..."
No book will open, I get an "Invalid Item" error and it suggests I redownload it.
I have a rooted 1st generation KF with GoLauncher on it and ...I dunno if it's a custom rom or what.
I get a blue kindle fire logo when I first power up. I just installed the recommended stuff with the Kindle Fire Utility.
Fixes I've tried:
1. Restarting the device
2. Force stopping the app, then clearing the cache.
3. Going to the play store and choosing "Uninstall". The problem is, this doesn't really uninstall the app, it says something like "this will uninstall all updates to the kindle reader". If I go to settings --> applications, the option to fully uninstall is grayed out.
After doing the google play 'uninstall', the device freezes if I try to launch the reader.
4. Manually reinstalling/updating via the google play store. Now it launches and the device doesn't freeze, but I still get the errors. Also my books are gone but that's no biggie.
I also called tech support. They had me unregister my device from settings --> My Account... and eventually re-register it.
They also had me clear cache. Then those things didn't work they elevated me to level 2 tech support.
I foolishly mentioned I had the go launcher installed, they refused to help any further and insisted the 3rd party launcher was the cause of the problem, and my only fix is to factory reset and stick to the stock software.
So, if you made it this far, thanks for listening... now what?

If you have Root Explorer (or equivelent) for access to system apk files, you could try deleting that app from the /system/app folder, restart the device, go back to the system apps, paste another copy (or version) of that app in there and set permissions to match the other apks in the folder, reboot and hope it might correct the issue. It sounds like a software glitch from the getgo even on un-rooted devices.

howdy, thanks for the idea.
I have root explorer and root access, but when I go to rename or delete anything in that folder, I get "the file cannot be renamed because the file system is read only".
Also, I'm only assuming it's the app called "Kindle for Otter" which is the only one with the traditional kindle reader icon of a dude under a tree reading.
Is there an alternative reader that's still very convenient? Like I don't have to download books via USB or anything, it just monitors the appropriate folders and my freshly-purchased books appear in the list?

CreeDo said:
howdy, thanks for the idea.
I have root explorer and root access, but when I go to rename or delete anything in that folder, I get "the file cannot be renamed because the file system is read only".
Also, I'm only assuming it's the app called "Kindle for Otter" which is the only one with the traditional kindle reader icon of a dude under a tree reading.
Is there an alternative reader that's still very convenient? Like I don't have to download books via USB or anything, it just monitors the appropriate folders and my freshly-purchased books appear in the list?
Click to expand...
Click to collapse
You must just be rooted and not have any custom ROM installed otherwise you could mount the system/app folder as r/w, meaning you probably don't have Superuser installed? Superuser is supposed to be installed when you root the device with the Kindle Utility but I couldn't get it to do it. Since you are rooted then you could try the MoDoCo ROM as it is based on Amazon's own 6.3.1 software and includes the Kindle Reader, Amazon app store and everything that is included with the stock software. In addition it includes the Google services framework and Playstore so you can have the best of both worlds, Google and Amazon. It runs much better than stock and I just flashed it onto my wife's Kindle and she is pretty satisfied with it.
There are plenty of decent reader apps and my suggestion would be try many different ones until you find a suitable one.

Josepho1997 said:
Actually, you just have to click the button on the top of root explorer. It should says "Mount R/W" Click it. Now you should be able to delete it and replace it.
Sent from my Kindle Fire using xda premium
Click to expand...
Click to collapse
Yes that is true but if Superuser (or equivelent) isnt present it doesnt work to well

Well, the mountR/W thing worked, and since then I've gone through a bunch of stuff.
And I'm back to square one. But read anyway if you're bored.
I'm a the point where I could reluctantly nuke everything and start over, I guess that would involve reflashing the rom
and reinstalling all apps?
Here's what I've tried:
• Replaced kindleforotter.apk, set permissions, and rebooted, when the kindle came back up it went straight to the stock launcher... weird.
Maybe cuz GoLauncher coincidentally updated.
• At this point I should click that APK, right? But, curious, I went to my books tab.
All my books are there but missing covers. Some have a down arrow/download icon, others don't.
• 4 books without the icon successfully redownloaded after an error, and were readable.
Sadly these are all older books and the other 20 or 30 books would not do anything when tapped.
• Next I tried reinstalling the app by clicking the kindleforotter.apk I downloaded. It reinstalled, I rebooted,
clicking the shortcut still doesn't work but I went back to the books tab in my kindle launcher.
Now, none of the items launch. The "Invalid Title" items give that error again, but this time they do not redownload.
• I tried removing everything from sdcard/Books and sdcard/Kindle and rebooting. Now only those 4 'lucky' books show up.
But they no longer open when tapped. Looks like it's trying to launch the reader but it crashes.
• Tried manually resending the latest book to my kindle via Amazon's website. It didn't show up.
• So I clicked Sync under my settings icon, and that really hosed it. The kindle launcher would infinitely crash and reopen.
• Since that's worse than the original issue I just updated the reader via the play store, getting myself back to square one.
Thanks if anyone has any other ideas... or some less painful way to reinstall this app completely without wiping out everything.

Sounds like a big mess.....you might just have to start over from scratch. At least that "should" clear up the misc. errors you're receiving. You'd have to re-root if but that process is simple. Reinstalling apps might take a little time but would be worth it if it corrects the issue. The Kindle's stock software (or any software) is not immune to undesirable performance.
One basic correction attempt with software and operating systems is to wipe it clean and re-install. I've had many PCs that had to be wiped and the OS re-installed to fix messed up stuff. Usually we try to re-install apps first to see if it corrects it......sounds like you've already done that.
You could always just find an alternative reader

Howdy... I went ahead and tried support one more time (sometimes you get lucky) but they had no ideas other than a factory reset. I'm gonna look into modaco.
edit: on the off chance you come back to this thread,
I factory reset, installed modaco via TWRP, have one problem.
Books work fine. But I can't access my apps.
When I click the "Apps" tab at the top, the screen flashes briefly and then I'm right back to the usual home screen
(aka the default kindle launcher screen).
I seem to remember a notification (with an amazon icon) about pending app downloads, in the bar at the top.
I skipped over it to check on my books. Now it's gone, and I can't get it back or view a list of apps on the system.
What gives?

CreeDo said:
Howdy... I went ahead and tried support one more time (sometimes you get lucky) but they had no ideas other than a factory reset. I'm gonna look into modaco.
edit: on the off chance you come back to this thread,
I factory reset, installed modaco via TWRP, have one problem.
Books work fine. But I can't access my apps.
When I click the "Apps" tab at the top, the screen flashes briefly and then I'm right back to the usual home screen
(aka the default kindle launcher screen).
I seem to remember a notification (with an amazon icon) about pending app downloads, in the bar at the top.
I skipped over it to check on my books. Now it's gone, and I can't get it back or view a list of apps on the system.
What gives?
Click to expand...
Click to collapse
That's odd......I never experienced that with MoDaCo. Did you wipe everything before you flashed MoDaCo (cache, dalvik, factory reset and system)? There were slight bugs with MoDaCo I noticed but nothing like that. Try reflashing but dont wipe sd card

guitarman2010 said:
That's odd......I never experienced that with MoDaCo. Did you wipe everything before you flashed MoDaCo (cache, dalvik, factory reset and system)? There were slight bugs with MoDaCo I noticed but nothing like that. Try reflashing but dont wipe sd card
Click to expand...
Click to collapse
I'll see if I can do that. One worry I had... I see modaco is offered in more than one place, and seems to have some options with the installation...
can you point me to a specific zip file that you know for sure is a good working one? Otherwise, I'll assume my zip is good but my wipe wasn't. I just factory reset and never messed with dalvik and the rest, I'm guessing that's all important...

CreeDo said:
Very few search results for this error, so I'm out of ideas. It has come up once before but the thread is closed -->
http://forum.xda-developers.com/showthread.php?t=1356441
My reader worked fine for 8 months. Then it updated to version 3.7.0.108.
?
Click to expand...
Click to collapse
I had the same problem. Solved it by going back to an earlier version of the app.3.6.0.87.

Hey, just wanted to thank you, I reinstalled modaco, but first did the cache wipe and dalvid wipe from the TWRP menus. Apps tab works fine now. Books too.
So far only one minor hiccup... the apps I had formerly installed via GoLauncher. I logged into google play, redownloaded one of them (DrawSomething) and specified that it send the app to my Kindle Fire from the dropdown. It gave me something like "this app will be installed shortly". But I never got anything... no download, no notification. Did it a second time and same deal. Eventually I downloaded it from the Amazon app store, but I'm worried apps from Google Play won't work easily anymore.
Do you know what I should do if I need an app from Google Play?

Had same problem
In case it helps anyone else. I had the same problem. Turns out that the google play store (which remember doesn't come standard with a Fire) had updated the Amazon Kindle application. I went into the play store and uninstalled (un-updated) the Amazon Kindle app and then everything worked.
Good Luck!

Old version solved it!
mochamoo said:
I had the same problem. Solved it by going back to an earlier version of the app.3.6.0.87.
Click to expand...
Click to collapse
I have a rooted 1st gen KF running a cyanogen ICS ROM where the Kindle app had been working fine for a while, but suddenly wasn't registered and I couldn't even get the register dialog to display. Found the 3.6.0.87 apk online, installed it and it works fine now.

FYI 3.6.0.87 works on non rooted
pofigster said:
I have a rooted 1st gen KF running a cyanogen ICS ROM where the Kindle app had been working fine for a while, but suddenly wasn't registered and I couldn't even get the register dialog to display. Found the 3.6.0.87 apk online, installed it and it works fine now.
Click to expand...
Click to collapse
This fixes the same problem for non-rooted Kindle Fires where you are running an sideloaded launcher and the Kindle book app and need to reregister.

[Q] Unable to connect to PC properly after rooting

Hello,
I have had my HTC One M8 for a while now but I wasn't really happy with the soundquality while playing through my headphones, so I looked for ways to improve it. I found a few methods and finally decided to give it a try. These methods require a root so yesterday I have rooted my phone for the first time. Unfortunately I am experiencing some problems now.
The rooting process went without too much trouble. I used hasoon2000's toolkit and have TWRP version 2.7.0.2 installed as recovery and used it to install the provided SuperSU, which didn't work at first. On the forums I found a newer version and installed that one, updated it and got it to work.
Now this is where I think I messed up: I read somewhere that when rooted, you are able to delete pre-installed apps from the phone. I downloaded SD maid and deleted Kid Mode, Zoe and 7digital. When I deleted Kid Mode I got an error saying it has crashed. I tapped away the error but from this point I couldn't go back to my homescreen anymore because my launcher kept crashing (com.htc.launcher crashed). I rebooted the phone and the launcher worked again, but the phone still seemed to be buggy.
After this I tried to install the snapdragon audio+ (this was my first choice for an equalizer). I downloaded the apk and moved it to the system folder using ES file manager. I installed but when I tried to use it (through settings in google play music app) my phone would crash. I uninstalled it and tried again, but when I tried to move the apk to the system map like before, my phone would crash everytime. I then found out the file I used doesn't work for lollipop so I figured that's what caused the crashes.
My next move was to try and install viper4android. I downloaded it from the Play Store and opened it. It told me it needed an installation of BusyBox so I downloaded that too. But when I opened the BusyBox app and clicked install my phone would crash again. After some searching I found that the HTC One M8 requires BusyBox to be flashed manually so I downloaded the file but when I tried to load it onto my phone I noticed this wasn't possible anymore.
Now when I connect my phone to my PC the PC recognizes it, but when I open the map in Windows Explorer it only shows three maps; .showme, _nero_sync and Ringtones. I know there should be more as they were there before. It also shows my phone's capacity as a total of 10GB (shouldn't this be 16GB?). Also when I try to connect it with Sync Manager it gives me an error everytime I reconnect the phone; Device unavailable. Please reconnect your device [4].
I have tried to reset the phone through settings, wipe with TWRP and fix permissions with TWRP. I also tried reinstalling Sync Manager and the drivers on my PC. What I'm thinking now is I maybe have done something wrong in the ES file explorer that would make the folders unaccessible.
My phone is running stock android 5.0.1 and my PC Windows 7 64-bit.
I hope someone can help me, Thanks.
P.S: Sorry for the long post, I figured I'd give as much info as possible.

@Steef076 First update recovery to the latest one (2.8.6.0)
Second if you go and delete vital or integrated parts of the stock rom you will get a lot of bugs. Third, viper4android requires to write system and you can't write system with the stock kernel, you need an unsecured kernel or unsecure it yourself.
10GB is right since 6 is eaten by android. At this point I would just revert to a backup or install any custom rom around here. Most are close to stock and with no bloatware and come with root. You can even clean them further using a tool called ROM Cleaner. It will most likely solve all your problems

Did the deleted system apps reappear after reboot, or do they remain "uninstalled"? If the system is write protected like TempestZ states, any deleted system apps should reappear after a reboot.
Revert your nandroid to restore the system apps. And you didn't make a nandroid, you really should before making any system modifications for the very reason that it allows you to revert if you run into problems.
Another good practice, is if you don't know what effect deleting a system app will have (such as "safe to delete" lists that can sometimes be found on XDA) you should first freeze the app with Titanium Backup. If freezing doesn't cause any issues, then go ahead and delete. If you do have issues, just unfreeze the app.
Steef076 said:
Now when I connect my phone to my PC the PC recognizes it, but when I open the map in Windows Explorer it only shows three maps; .showme, _nero_sync and Ringtones. I know there should be more as they were there before. It also shows my phone's capacity as a total of 10GB (shouldn't this be 16GB?). Also when I try to connect it with Sync Manager it gives me an error everytime I reconnect the phone; Device unavailable. Please reconnect your device [4].
Click to expand...
Click to collapse
No, Windows will never show 16 GB. It only shows "internal storage" partition, or the user accessible portion of the storage. A good chunk is reserved for the OS.
Does what is shown in Windows differ from what is shown in ES if you browse to internal storage?

Thanks for the replies. @TempestZ @redpoint73
First of all I managed to update twrp to 2.8.6.0 using adb/fastboot.
To answer your question @redpoint73 the system apps I had deleted indeed reappeared after reboot. Also I didn't make a nandroid before I deleted the files, as I did not even know this was possible. Now I have made a nandroid of my stock ROM that is working decently, except for the TV app keeps crashing (I'm not opening it) and the connection to the PC is not working properly (not sure if this is ROM based?). I have noticed when the phone is in recovery I CAN see the folders through windows explorer. HTC sync manager still doesn't find it though. I am working on finding a proper stock ROM or maybe flash a custom one to see if that will fix it.
I understand now that the OS is taking up the storage space. The space windows is showing is the same as ES file manager so I guess this is fine.

HTC Sync is a hot mess. It often causes more troubles than it solves.
One thing you can try (to see if it fixes the USB connectivity) is uninstall HTC Sync and all HTC drivers. Than connect the phone. Don't let it install HTC Sync. Go to Windows Device Manager, find the device. Then pick the option to manually select the drivers, and pick the generic "Android MTP device" (or something to that effect) drivers.
This doesn't work for everyone. But it worked for me to be able to "see" the internal storage of my M8 on my home PC (Win 7). Annoyingly, it seems to vary from one PC to another. My work laptop (also Win 7) works fine with HTC Sync.

Steef076 said:
So if I understand correctly, 'version-main' is the same as 'firmware' and 'software number' (found in settings)? If so, my current firmware seems to be 4.19.114.2.
Now, what you're saying is I should do an OTA but this isn't possible because I have a custom recovery right?
Also, when I want to flash stock rom and stock recovery or do a nand don't I need the files that fit my cidnum? How would your file work for me?
Click to expand...
Click to collapse
If yours already on 4.19.114.2 then no need to do OTA as that the latest.
and my backup will bring back your device back to stock as you first bought it when restore with a full wipe.
Try to solve your problem first, only when you really need the backup then only I will upload ... let me know

ckpv5 said:
If yours already on 4.19.114.2 then no need to do OTA as that the latest.
and my backup will bring back your device back to stock as you first bought it when restore with a full wipe.
Try to solve your problem first, only when you really need the backup then only I will upload ... let me know
Click to expand...
Click to collapse
Hello, sorry for the late reply.
I have decided to give a custom ROM a try. I now have ARHD 41.0 installed and it seems this took care of my problems. All the maps are showing in windows explorer and HTC sync manager is connecting properly with my phone again. Also no more crashing apps. Your backup would still be of much use for me as I am not sure I want to stick with a custom ROM and therefore would like to have a stock ROM backup.
Thanks in advance.